PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D05G2434
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 139aa    MW: 15687 Da    PI: 10.8685
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D05G2434genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.73.3e-1570129463
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  + r + ++kNRe+A  sR+RK+a+ +eLe++v+ L++eN +L+k  ++    + +l +++
  Gh_D05G2434  70 DLRLKLMMKNRESAAQSRARKQAYKKELEREVAHLKEENAKLRKHQKKVMAAINQLPKKN 129
                  568899******************************************999999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-1267131IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.82969125IPR004827Basic-leucine zipper domain
CDDcd147071.89E-1772116No hitNo description
PfamPF001703.3E-1372129IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-972120No hitNo description
Gene3DG3DSA:1.20.5.1702.9E-1273125No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MEEVGKDISL SSLNGISLQG KHGTLISTAA TNPAFPSMIL QDFFGHTLQQ YTSNNILGKR  60
AQGNNENPDD LRLKLMMKNR ESAAQSRARK QAYKKELERE VAHLKEENAK LRKHQKKVMA  120
AINQLPKKNR LSRSLTTPF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012441887.12e-49PREDICTED: protein FD-like
TrEMBLA0A0D2TW172e-49A0A0D2TW17_G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-24bZIP family protein